AMBER Archive (2006)

Subject: Re: AMBER: hydronium ion parameters

From: Jiten (jiten_at_postech.ac.kr)
Date: Fri Sep 08 2006 - 10:12:03 CDT

HI Mr. Yi,

If it is old format, make pdb file of the hydronium ion- load to xleap - add
charges, assign atom type properly (similar to the frc file) and save the
prep file.

Jiten

----- Original Message -----
From: "Myunggi Yi" <myunggi_at_gmail.com>
To: <amber_at_scripps.edu>
Sent: Friday, September 08, 2006 11:31 PM
Subject: Re: AMBER: hydronium ion parameters

>I found one.
>
> http://pharmacy.man.ac.uk/amber/
>
> However, it looks old format which I can't understand.
>
> How can I read or convert to amber 7-9 version?
>
>
>
> On 9/8/06, Myunggi Yi <myunggi_at_gmail.com> wrote:
>> Dear users,
>>
>> Where can I find hydronium ion parameters?
>>
>>
>> --
>> Best wishes,
>>
>> MYUNGGI YI
>> -----------------------------------------------------------------------
>> The AMBER Mail Reflector
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>
>
> --
> Best wishes,
>
> MYUNGGI YI
> ==================================
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> Institute of Molecular Biophysics
> Florida State University
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>
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