AMBER Archive (2006)

Subject: AMBER: holding a pair of residues fixed during minimization

From: Seth Lilavivat (sethl_at_gatech.edu)
Date: Tue Aug 22 2006 - 22:22:06 CDT

Dear Amber Community,
 
What is the proper syntax for holding a few residues fixed during
minimization with Sander? If I wanted to hold residues 6,7, 18, 19
fixed for example, would I do something like:
 
RES 6 6
RES 7 7
RES 18 18
RES 19 19
 
Thanks,
Seth

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