AMBER Archive (2006)

Subject: Re: AMBER: help with leap

From: Bill Ross (
Date: Wed Aug 16 2006 - 19:51:56 CDT

> in xleap there appear to be many
> extra unconnected atoms.

Make your residue and atom names agree w/ amber conventions,
or add mappings. To just get bonds drawn to see things looking
normal, try bondbydistance.. but this is useless for further

The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to