AMBER Archive (2006)

Subject: AMBER: Where can I find the SMD parameter file (or simple turtorial) in AMBER9

From: Cheng Luo, Ph.D. (cluo_at_wistar.org)
Date: Fri Aug 11 2006 - 15:41:32 CDT

Hi,

I am new user about SMD on AMBER9.

Does any know where can I find the SMD parameter file (or simple turtorial) in AMBER9. I want to pull a compound from a channel of a protein. However, there is only very simple words about SMD in AMBER9 manual. If you know sth about it, please feel free to give me some advices or if you can send me your input file in SMD, that is better.

Thank you very in advance!

Best regards,

Cheng Luo

The Wistar Institute
PA(19104) USA

2006-08-11

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