AMBER Archive (2006)

Subject: AMBER: Harmonic restraint along z-axis

From: Myunggi Yi (myunggi_at_gmail.com)
Date: Wed Jul 26 2006 - 19:26:02 CDT


Dear Amber user,

I'd like to restrain some atoms at a certain value (z=5.0) along
the z-axis with a harmonic potential during simulations.
The source code is so complicated for me.
Would you give me some draft or orientation for adding
my own potential to the sander code?

-- 
Best wishes,

MYUNGGI YI ================================== KLB 419 Institute of Molecular Biophysics Florida State University Tallahassee, FL 32306

Office: (850) 645-1334 http://www.scs.fsu.edu/~myunggi ----------------------------------------------------------------------- The AMBER Mail Reflector To post, send mail to amber_at_scripps.edu To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu