AMBER Archive (2006)

Subject: Re: AMBER: ptraj vector

From: Thomas Cheatham (
Date: Tue Jun 20 2006 - 17:13:06 CDT

> vector v1 @12 @13
> #vector v2 :4-37_at_P corrplane order 2
> analyze timecorr vec1 v1 tcorr 1500 dplr norm out

Ah, I opened my mouth too quickly. For my test cases, AMBER9 and
AMBER8 ptraj seems to work fine. My development version does not (and
likely those on my WWW page do not) :-(

So, are you sure you are using an AMBER8 version of ptraj?


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