AMBER Archive (2006)

Subject: AMBER: Problem of Ptraj in AMBER9

From: Chunhu Tan (
Date: Tue Jun 13 2006 - 17:24:26 CDT

Hi, All,

   It seems that the ptraj in AMBER9 does not support the output format
"restart". When I specified the output format to "restart", the output
was always with the trajectory format. Could somebody tell me what is
wrong with my ptraj?
   Here is a sample script I used in ptraj:

   trajin gc.crd 1 1
   trajout test restart

Attachments are the parm file and the gc.crd



  • application/octet-stream attachment: gca.rar

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