AMBER Archive (2006)

Subject: Re: AMBER: compiling errors

From: Alex Tzanov (alex.tzanov_at_nyu.edu)
Date: Mon Apr 24 2006 - 21:04:10 CDT


Hi Guys,

This works. I tried on 7.4 and is OK.
Many thanks

Alex

Ross Walker wrote:

> Hi Alex,
>
> This was fixed 'I believe' on the 21st of April.
>
> See bugfix 1: http://amber.scripps.edu/bugfixes90.html
>
> If this still doesn't work please let us know.
>
> All the best
> Ross
>
> /\
> \/
> |\oss Walker
>
> | HPC Consultant and Staff Scientist |
> | San Diego Supercomputer Center |
> | Tel: +1 858 822 0854 | EMail:- ross_at_rosswalker.co.uk |
> | http://www.rosswalker.co.uk | PGP Key available on request |
>
> Note: Electronic Mail is not secure, has no guarantee of delivery, may not
> be read every day, and should not be used for urgent or sensitive issues.
>
> > -----Original Message-----
> > From: owner-amber_at_scripps.edu
> > [mailto:owner-amber_at_scripps.edu] On Behalf Of Alex Tzanov
> > Sent: Monday, April 24, 2006 17:18
> > To: amber_at_scripps.edu
> > Subject: AMBER: compiling errors
> >
> > I am trying to install Amber 9
> > on SGI rix 6.5 and I am getting:
> >
> > cc-1241 cc: ERROR File = ptraj.c, Line = 4038
> > A declaration cannot appear after an executable statement
> > in a block.
> >
> > int natomCL = lesSize( atoms );
> > ^
> >
> > cc-1241 cc: ERROR File = ptraj.c, Line = 4040
> > A declaration cannot appear after an executable statement
> > in a block.
> >
> > double* xrep = safe_malloc( sizeof( double ) * natomCL );
> > ^
> >
> > cc-1241 cc: ERROR File = ptraj.c, Line = 4041
> > A declaration cannot appear after an executable statement
> > in a block.
> >
> > double* yrep = safe_malloc( sizeof( double ) * natomCL );
> > ^
> >
> > cc-1241 cc: ERROR File = ptraj.c, Line = 4042
> > A declaration cannot appear after an executable statement
> > in a block.
> >
> > double* zrep = safe_malloc( sizeof( double ) * natomCL );
> > ^
> > Obviously a bug. Any suggestions?
> >
> > Thnaks
> >
> > Alex
> >
> > --
> > Alexander Tzanov
> > Scientific Computing and Visualization
> > New York University, WWH
> > 251 Mercer Street
> > phone: 212 998 3159
> > fax: 212 995 4120
> > e-mail: alex.tzanov_at_nyu.edu
> >
> >
> >
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--
Alexander Tzanov
Scientific Computing and Visualization
New York University, WWH
251 Mercer Street
phone: 212 998 3159
fax:   212 995 4120
e-mail: alex.tzanov_at_nyu.edu

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