AMBER Archive (2006)

Subject: AMBER: ambpdb and original PDB

From: snoze pa (snoze.pa_at_gmail.com)
Date: Mon Apr 17 2006 - 13:20:05 CDT

Hi,
 After minimization, i generate a PDB file using ambpdb, but the center of
PDB coordinate from ambpdb seems to different from the original PDB file.
Is it okie, because I want to compare the changes in my original PDB file
after minization. If yes then how can I overlap these two structures?
thanks in advance
snoze

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