AMBER Archive (2006)

Subject: Re: AMBER: amber8 error installation

From: Abd Ghani Abd Aziz (ghaniee_at_yahoo.com)
Date: Tue Mar 28 2006 - 10:27:37 CST

Mark,

Thanks for the suggestion... for your info i have
experience installing amber 8 on my own cluster which
is running redhat linux As3... it works great.. now i
would like to install amber 8 on another cluster which
running Rock Clusters ... before installing amber8
with parallel i think better that I get some
experience to install using serial first.. but then i
got the error.... i dont have any idea about the
Rock.. i've never experience with Rock before this...
by the way thanks for your helps...

Abd Ghani

--- Mark Williamson <Mark.Williamson_at_imperial.ac.uk>
wrote:

> > so .. do i need to install byacc rpm and
> XFree86-devel
> > rpm ???
> >
>
> I've very little experience with Rocks, but I
> *think* is built around
> RHEL, hence the RPM packages will have the same
> names.
>
> I'd recommend having a long chat with the person
> that runs the cluster;
> getting sander to compile and work in parallel will
> be harder. Since you
> are compiling using ifort, some fortran components
> of lam will need to
> be compiled with ifort as well and be present on
> every node.
>
> You may find the search tool at
> http://amber.ch.ic.ac.uk/archive/ useful
> as well as this link:
>
> http://amber.ch.ic.ac.uk/cluster_info/index.html
>
> with special attention to the "export FC=ifort" in
> the "Compiling
> Amber8 with Intel compilers and LAM MPI" section.
>
> regards,
>
> Mark
>
>
> http://dumb.ch.ic.ac.uk/~mjw99/
>
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