AMBER Archive (2006)

Subject: RE: AMBER: amber 8 problem

From: Abd Ghani Abd Aziz (ghaniee_at_yahoo.com)
Date: Mon Feb 20 2006 - 22:55:27 CST

thanks to all for the helps...

--- Ross Walker <ross_at_rosswalker.co.uk> wrote:

> > /usr/local/amber8/exe/sander: error while loading
> > shared libraries: libcxa.so.5: cannot open shared
> > object file: No such file or directory
> >
> > i knew there is something to do with the ifort
> > compiler but i don't know how to solve it.
>
> You need to add the following to the users .cshrc or
> .bashrc file:
>
> CSH
> ---
> source /opt/intel_cc_80/bin/iccvars.csh
> source /opt/intel_fc_80/bin/ifortvars.csh (or
> similar path)
>
> BASH
> ----
> source /opt/intel_cc_80/bin/iccvars.sh
> source /opt/intel_fc_80/bin/ifortvars.sh (or
> similar path)
>
> This will setup the correct LD_LIBRARY_PATH and PATH
> environment variables
> for you.
>
> You can also compile amber statically (./configure
> ... -static ...) and
> avoid this problem. Although for parallel you also
> need to compile the mpi
> installation statically.
>
> All the best
> Ross
>
> /\
> \/
> |\oss Walker
>
> | Department of Molecular Biology TPC15 |
> | The Scripps Research Institute |
> | Tel: +1 858 784 8889 | EMail:-
> ross_at_rosswalker.co.uk |
> | http://www.rosswalker.co.uk | PGP Key available on
> request |
>
> Note: Electronic Mail is not secure, has no
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>
>
>
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