AMBER Archive (2006)

Subject: AMBER: Question about renaming a residue

From: Kara Di Giorgio (kdigiorgio_at_sbcglobal.net)
Date: Fri Feb 17 2006 - 17:28:26 CST

I've created two different residues in the past and they were both
called UNK. I didn't think about it as they were not used at the same
time. However, now I DO want to use them as part of the same
simulation. How would I change the name of one of them in such a way
that xLeap recognizes them as different. I've tried re-naming things
in the past, but the original name seemed to stay as part of it. Was I
incorrect? How would you suggest going about this? (Just re-creating
one of the residues as something other than UNK isn't an easy option as
they were difficult to set up in the past.)

Any help would be greatly appreciated.

Thanks,

Kara Di Giorgio
University of the Pacific

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