AMBER Archive (2006)

Subject: AMBER: protein ligand complex

From: snoze pa (
Date: Wed Feb 01 2006 - 11:21:21 CST

Hi, I am a new user in amber community. I want to simulate my protein which
has a ligand bound to it. This is a small
organic molecule bound to the active site in the protein. I want to know how
can i start my setup using this ligand and protein.
Any help from scratch will be higly appreciated.
thanks in advance.

The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to