AMBER Archive (2006)

Subject: AMBER: amber: problem in center command

From: xiphias xie (
Date: Thu Jan 19 2006 - 20:36:27 CST

Deal all:
  I am so sory to bother you again .
  Here is my scrip:
trajin C-C-md1.mdcrd
trajin C-C-md2.mdcrd
trajout C-C-md.mdcrd
center origin
when I ran it , it display that :

PTRAJ: trajin C-C1-md1.mdcrd
Checking coordinates: C-C1-md1.mdcrd

PTRAJ: trajin C-C1-md2.mdcrd
Checking coordinates: C-C1-md2.mdcrd
WARNING in checkCoordinates(): File is corrupted...
   '*' detected in AMBER trajectory (C-C1-md2.mdcrd)

PTRAJ: trajout C-C1-md.mdcrd

PTRAJ: center origin
Mask [*] represents 6696 atoms


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