AMBER Archive (2006)

Subject: AMBER: base-base interaction

From: Douali, Latifa (latifa.douali_at_pnl.gov)
Date: Fri Jan 13 2006 - 11:54:32 CST

Hi all,

Is there a way to calculate base-base interactions in DNA or RNA
duplexes using ptraj module of AMBER?
I would appreciate if somebody could give me some information on how we
can do that.

Thank you in advance.

Latifa
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