AMBER Archive (2004)

Subject: AMBER: MD: Water network analysis + visualization

From: Sanjeev B.S. (
Date: Fri Dec 17 2004 - 12:23:22 CST

        I just finished a code that scans MD trajectories to identify,
characterize and visualize (using VMD) water networks, even for fast
exchange water molecules. I would appriciate any feedback on this. It's
still experimental so bugs could be present. Please mail any response to
It is available at:

Thanking in advance,
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