AMBER Archive (2004)

Subject: AMBER: md.out & plot

From: bybaker_at_itsa.ucsf.edu
Date: Tue Nov 23 2004 - 16:23:41 CST

Hello, Amber:

I use the command of ‘perl process_mdout.perl md1.out’ to generate the
summaries from one Amber md run. I would like to plot them with Excel or
Prism programs. The files' format can not be recognized by either of
these programs. I don’t have ‘xmgr’. If I manually delete the time
points, it takes a long time and easy to make mistakes. Can any one
suggest me how to convert these files into the files that can be used for
Excel?

Thank you very much for your help.

Regards

Bo

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