AMBER Archive (2004)

Subject: AMBER: Babel

From: bybaker_at_itsa.ucsf.edu
Date: Sun Nov 14 2004 - 01:29:40 CST


('binary' encoding is not supported, stored as-is) Hi,

Thank you very much for the suggestion. I found some issues about 'babel'
from Amber mail-reflectors, and tried the command'babel -ipdb model.pdb
-omol2 model.mol2'. I got the message saying that 'The environment
variable BABEL_DIR is not defined. Please define this variable to so
babel can find element.lis'. Is 'Babel' a part of 'Amber7'? it is seems a
part of R.E.D. But I can't find where it is in the Amber7 manual.

Thanks for your helps.

Regards

Bo

On Sun, 14 Nov 2004 12:57:32 +0800 "Ye Mei" wrote:

> You can try babel or openbabel.
>
> ======= 2004-11-13 21:35:45 =======
>

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