AMBER Archive (2004)

Subject: AMBER: constructing a small colecule

From: mathew k varghese (
Date: Thu Nov 04 2004 - 22:41:58 CST

Dear AMBER users,

I have the coordinates of a samall
molecule.(Derrivative of curcumin) How can I create
the file in ac format to use it with the antechamber
package? Is it possible to run the antechamber program
to assign atom types for the atoms? In the tutorial
for antechamber there is a mention about sybyl(edit
EFZ.pdb with sybyl).What is it actually?


Mathew K Varghese
Research Scholar
School of Pure and Applied Physics
Kottayam, Kerala


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