AMBER Archive (2004)

Subject: AMBER: RSM fluctuation by residues

From: bybaker_at_itsa.ucsf.edu
Date: Sun Oct 31 2004 - 01:22:53 CDT


('binary' encoding is not supported, stored as-is) Hello, Amber:

I would like to extract the rms fluctuation information on certain
residues. Here is my input:

----
trajin model1-3-md1.crd
center :1-215 mass origin
mass origin center

rms first mass out rms_200-214.dat :200-214 atomicfluct out fluct_byres1.dat :200-214

strip :WAT go

----

It went through. When I check the outputs, only the atom fluctuation data are there. How can I tell the program to extract rms fluctuation by residues only?

Thank you for your help.

Bo

----------------------------------------------------------------------- The AMBER Mail Reflector To post, send mail to amber_at_scripps.edu To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu