AMBER Archive (2004)

Subject: Re: AMBER: question on NAB

From: David A. Case (case_at_scripps.edu)
Date: Tue Oct 19 2004 - 10:06:50 CDT


On Mon, Oct 18, 2004, ioana_at_pegasus.arc.nasa.gov wrote:
>
> I would like to know exactly where is the NAB program taking the
> structural information in its data base (residue library) which is further
> used to generate initial structures for DNA/RNA molecules.

My recollection is that the residue libraries were constructed from the
Amber residue libraries, probably using the 1984 (united atom) and 1986
(all atom) force fields.

....dac

-- 

================================================================== David A. Case | e-mail: case_at_scripps.edu Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896 The Scripps Research Institute | phone: +1-858-784-9768 10550 N. Torrey Pines Rd. | home page: La Jolla CA 92037 USA | http://www.scripps.edu/case ================================================================== ----------------------------------------------------------------------- The AMBER Mail Reflector To post, send mail to amber_at_scripps.edu To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu