AMBER Archive (2004)

Subject: Re: AMBER: process_mdout.perl

From: Tomas Linhart (linht0am_at_karlov.mff.cuni.cz)
Date: Tue Oct 12 2004 - 02:43:28 CDT


It seems like you do not have execution permissions to run it. Try

        chmod u+x process_mdout.perl

and run it again.

On Mon, Oct 11, 2004 at 11:08:06PM -0700, bybaker_at_itsa.ucsf.edu wrote:
> Hello, Amber:
>
> I try to extract energy information from my output files. In order to do
> so, I copy the 'process_mdout.perl' file into my directory from
> '/usr/local/amber7/tutorial/polyA-polyT' of the local workstation. Here
> is how I did:
>
> ----
> % process_mdout.perl model1min2.out
> % process_mdout: Permission denied.
> ----
>
> Could you please tell me why it does not work, and how can I add
> process_mdout.perl in my path? I use AMBER7 and Mac OSX.
>
> Thank you.
>
> Bo
>
>
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