AMBER Archive (2004)

Subject: Re: AMBER: Running on MPI

From: Jiten (jiten_at_postech.ac.kr)
Date: Sun Oct 03 2004 - 22:08:54 CDT

Hello,

A careful look at http://amber.scripps.edu/cluster_info/index.html may help
you.

Jiten

----- Original Message -----
From: "wish_71" <wish_71_at_sina.com>
To: <amber_at_scripps.edu>
Sent: Monday, October 04, 2004 10:59 AM
Subject: AMBER: Running on MPI

> Hi, Dear all amber users,
>
> Recently, I installed AMBER7 in 32-CPU PC-cluster in the Red Hat Linux
> system.
>
> The correct running format of Sander is as following???
>
> mpirun -np 4 sander -O -i md.in -o md.out -p md.top -c md.crd -r
> md.restrt -ref md.crd
>
> When I input above words, the sander does not work? Then how about the
> correct running format?
>
> Looking forward to any help!
>
> Thanks a lot in advance!
>
> Best wishes,
>
> Wu Yingliang
> 　　　　　　　
> 2004-10-04
> =======================================
> College of Life Science
> Wuhan Univeristy
> Wuhan, China
> Email: wish_71_at_sina.com
> =======================================
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