AMBER Archive (2004)

Subject: Re: AMBER: (no subject)

From: M. L. Dodson (bdodson_at_scms.utmb.edu)
Date: Wed Sep 29 2004 - 10:39:12 CDT

On Wednesday 29 September 2004 09:24 am, Rasha Radwan wrote:
> Hi, I'm a new user of AMBER , and I need to know how to build a topology and coordinate files for pure water box. I know how to solvate any molecule in a water box, but my main concern is to get the water box by itself without any thing being solvated inside it.
> Rasha
>
>

One way that has been recommended in the past is to solvate a
single water molecule. 

-- 
M. L. Dodson                                bdodson_at_scms.utmb.edu
409-772-2178                                FAX: 409-747-8608

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