AMBER Archive (2004)

Subject: Re: AMBER: all_nucleic02 and all_nucleic94

From: David A. Case (case_at_scripps.edu)
Date: Wed Sep 22 2004 - 11:59:01 CDT

On Wed, Sep 22, 2004, Vlad Cojocaru wrote:

> Could somebody explain to me what is the difference between the
> all_nucleic94.lib and all_nucleic02.lib file in the amber library. I
> noticed that the charges on the residues differ.

Please see sections 2.4 and 2.5 of the Users' Manual. It has lots of
information specifically addressing how the charges in these two force fields
were developed. The Users' Manual is your friend.

...dac

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