AMBER Archive (2004)

Subject: Re: AMBER: bond constraints in nmode

From: David A. Case (
Date: Wed Sep 15 2004 - 11:03:09 CDT

On Wed, Sep 15, 2004, richard dimelow wrote:

> I was wondering if you can constrain the bonds involving hydrogens when
> using nmode to search for transition states or normal modes. Thanks in
> advance.

No...the nmode program doesn't implement SHAKE or any other constraint


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