AMBER Archive (2004)

Subject: Re: AMBER: Intel Fortran Compiler Problem

From: Viktor Hornak (hornak_at_csb.sunysb.edu)
Date: Wed Sep 15 2004 - 09:52:04 CDT

Robert Duke wrote:
> Maybe leave LOADLIB defined as nothing in the MACHINE file?

yes, this should compile...
setenv LOADLIB " "

-V.

> ----- Original Message -----
> From: "Stephen P. Molnar, Ph.D." <s.molnar_at_sbcglobal.net>
> To: "Amber" <amber_at_scripps.edu>
> Sent: Wednesday, September 15, 2004 11:13 AM
> Subject: Re: AMBER: Intel Fortran Compiler Problem
>
>
>
>>Thanks for your reply.
>>
>>On Wed, 2004-09-15 at 10:33, Viktor Hornak wrote:
>>
>>>Stephen P. Molnar, Ph.D. wrote:
>>>
>>>>I am attempting to compile Amber v7 for my SuSE9.0 linux partition
>
> using
>
>>>>the Inter Fortran Compiler v8.
>>>>
>>>>Unfortunately, I got the following error early on:
>>>>
>>>>/opt/intel_fc_80/bin/ifort -o new2oldparm new2oldparm.o nxtsec.o
>>>>-lPEPCF90
>>>>ld: cannot find -lPEPCF90
>>>>
>>>>Now, according, to the locate command PEPCF90 is part of the v7 Intel
>>>>compiler, and is not to be found in v8.
>>>>
>>>>What is the solution to this problem.
>>>
>>>removing the -lPEPCF90 from the MACHINE file should do it...
>>>
>>
>>Good suggestion! Unfortunately, it generated a new error:
>>mkdir ../exe
>>cd lib; make install
>>make[1]: Entering directory `/home/computation/amber7/src/lib'
>>../Compile L0 -P -DNEWPARM nxtsec.f
>>cat nxtsec.f | /lib/cpp -traditional -P -DNEWPARM -DLinux
>>-DMEM_ALLOC > _nxtsec_.f
>>/opt/intel_fc_80/bin/ifort -c -w -O2 _nxtsec_.f
>>../Compile LOAD -o new2oldparm new2oldparm.o nxtsec.o
>>LOADLIB: Undefined variable.
>>make[1]: *** [new2oldparm] Error 1
>>make[1]: Leaving directory `/home/computation/amber7/src/lib'
>>make: *** [install] Error 2
>>
>>
>>
>>>Cheers,
>>>-Viktor
>>
>>--
>>Stephen P. Molnar, Ph.D. Life is a fuzzy set
>>Foundation for Chemistry Stochastic and multibariant
>>http://www.geocities.com/FoundationForChemistry
>>
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>
>
>
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-- 
===================================================================
Viktor Hornak
Center for Structural Biology   Phone: (631)632-1439
SUNY at Stony Brook             Fax:   (631)632-1555
Stony Brook, NY 11794-5115      E-mail: viktor.hornak_at_sunysb.edu
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