AMBER Archive (2004)

Subject: AMBER: Pulling versus Distance Restraints

From: Nhat-hang Duong (nhduong_at_rci.rutgers.edu)
Date: Tue Aug 31 2004 - 16:16:15 CDT


Dear amber users,

In amber8, is pulling two specific atoms of a molecule (e.g. a protein)
to reasonable distance apart equivalent with restrainning the distance
between these two atoms?

If not, could anyone suggest a way to pull (or reposition) an atom in a
molecule?

Thanks,
--Hang
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