AMBER Archive (2004)

Subject: Re: AMBER: Moil-view, prmtop, inpcrd question

From: Viktor Hornak (hornak_at_csb.sunysb.edu)
Date: Fri Aug 13 2004 - 15:20:14 CDT

I can read your inpcrd/prmtop just fine. You might want to check your
moil-view installation. Is it only this specific coordinate/topology you
cannot read? Can you read other coordinate/topology files, say, from
amber tutorials or tests?

-Viktor

opitz_at_che.udel.edu wrote:
> Dear Amber Community,
>
> I am trying to load a molecule in moil-view10 using a prmtop and inpcrd
> file generated by xleap.
> At first I load the coordinate file. When it prompts to use connectivity
> files I choose yes and load my prmtop file. At this point the warning:
> CRD/CON mistmatch in #atom
> appears.
> I checked the inpcrd and prmtop files and they seemed fine. I don't know
> if this is a moil-view problem, and I don't know how I would fix it (if
> the problem lies here, I would greatly appreciate very detailed help).
> I have attached the two files in question.

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