AMBER Archive (2004)

Subject: AMBER: atomic positional fluctuation

From: RAJA SWAMINATHAN (genes2000_in_at_yahoo.com)
Date: Sat Aug 07 2004 - 02:18:32 CDT

Dear amber usrs

In general for a protein how much the atomic
positional fluctuations should vary. what is the
aprroximate range. r there any hard and fast rules for
this.

in my case i have ~150AA residues and it varies from
3-4A. I have used AMBER6.0 for my MD simulations.

suggestions pls

thanks in advance
raja

=====
If i have ever made any discoveries it has been owing only to my patience rather than to any other intelligence - Newton

                
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