AMBER Archive (2004)

Subject: AMBER: unnatural base - RESP charges in ANTECHAMBER

From: Dr. Rainer Glaser (glaserr_at_missouri.edu)
Date: Mon Jun 07 2004 - 19:12:56 CDT

Hi:

We'd like to compute RESP charges for an unnatural nucleoside. We
know how it works in principle -- the joint between the nucleoside
and the phosphate -- but we don't know how to setup the input for
ANTECHAMBER and there does not seem to be an example. Reading the
code to figure out the input would be an option; but it would take a
while and I'd rather not go that way. So, if there is somebody with
such an input, we would like to have that template. That would
really help us.

Best, Rainer. 

-- 
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