AMBER Archive (2004)

Subject: AMBER: free energy

From: A. Hungie (hungie01_at_hotmail.com)
Date: Fri Jun 04 2004 - 12:21:59 CDT

Dear All,

I would like to compare free energy of two conformations of dimer, by taking
into account water effect, also without water effect. What program should I
use, MM-PBSA or GIBBS? If I should use MM-PBSA, should I use GB or PB
method?
Thank you very much in advance.

Regards,
Hungie

_________________________________________________________________
STOP MORE SPAM with the new MSN 8 and get 2 months FREE*
http://join.msn.com/?page=features/junkmail

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu