AMBER Archive (2004)

Subject: Re: AMBER: sander8 performance

From: David A. Case (
Date: Tue Jun 01 2004 - 15:15:50 CDT

On Tue, Jun 01, 2004, Oliver Hucke wrote:

> So, the "hb" benchmark was done with pmemd?
> In the bench.hb script sander seems to be used...

The "bench.hb" script uses $TESTsander as the executable. This is set to
"../../exe/pmemd" for a pmemd benchmark.

I agree that the web page is not as explicit as it should be about this;
I will post an update to clarify things.


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