AMBER Archive (2004)

Subject: Re: AMBER: Problem compiling amber7

From: Joachim Reichelt (Reichelt_at_gbf.de)
Date: Tue May 25 2004 - 07:27:59 CDT

Miguel schrieb:

> Dear Viktor and amber,
>
> I got the Intel Fortran Compiler 8.0 fot compiling amber7 under SuSE 9.0, but it seems it's lacking something (I got the noncommercial version of ifc). When I make install, i got:
>
>cd lib; make install
>make[1]: Entering directory `/usr/local/amber7/src/lib'
>../Compile L0 -P -DNEWPARM nxtsec.f
>cat nxtsec.f | /lib/cpp -traditional -P -DNEWPARM -DLinux -DMEM_ALLOC > _nxtsec_.f
>ifc -c -w -O2 _nxtsec_.f
>../Compile LOAD -o new2oldparm new2oldparm.o nxtsec.o
>ifc -o new2oldparm new2oldparm.o nxtsec.o -lPEPCF90
>/usr/bin/ld: cannot find -PEPCF90
>
>
I just removed -lPEPCF90 from MACHINE and the prog runs prefectly!
It is for intels compiler < 8.0 only, and no longer in 8.0

>make[1]: *** [new2oldparm] Error 1
>make[1]: Leaving directory `/usr/local/amber7/src/lib'
>make: *** [install] Error 2
>
> Where can I get this lPEPCF90? When I used ift 7.0 it located it, but the problem was just with it...
>
> Thank you,
>
>Miguel.
>
>
>Viktor Hornak <hornak_at_csb.sunysb.edu> wrote:
>
>
>
>>Dear Miguel,
>>
>>I would try version 8.0 of Intel compilers with more recent linux
>>distributions (such as Suse 9.0). Version 7.0 didn't support newer glibc
>>libraries, which might be the reason you could compile in Suse 8.0 but
>>not in 9.0. That said, I was able to successfully compile amber7 (and
>>parallel sander passed all the tests) on Suse 9.0 using Intel fortran
>>compilers version 8.0 and mpich-1.2.5.2. I was using the Machine file
>>from the following amber page under RedHat 9 or Suse 8.2 sections:
>>http://amber.scripps.edu/cluster_info/compile_a7.html
>>
>>Hope this helps,
>>-Viktor
>>
>>Miguel wrote:
>>
>>
>>
>-----------------------------------------------------------------------
>The AMBER Mail Reflector
>To post, send mail to amber_at_scripps.edu
>To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu
>
> 

-- 
Mit freundlichen Gruessen                         Best Regards
 
         Joachim Reichelt

WWW: http://www.gbf.de/bragi   _/_/_/   _/_/_/   _/_/_/_/
WWW: http://www.gbf.de/sb    _/    _/  _/   _/  _/
WWW: http://www.gbf.de/     _/        _/   _/  _/
                           _/  _/    _/_/_/   _/_/_/
                          _/    _/  _/   _/  _/
Mascheroder Weg 1        _/    _/  _/   _/  _/
D-38124 Braunschweig      _/_/_/  _/_/_/   _/

Tel: +(49) 531 6181 352                  FAX: +(49) 531 2612 388

			SB  - Strukturbiologie
              GBF - Gesellschaft fuer Biotechnologische Forschung
                    German Research Centre for Biotechnology

See me at:
EMAIL: REICHELT_at_gbf.de    WWW:  http://www.gbf.de/sb/Reichelt.htm

-- Disclaimer --
Standard > Keyword : Opinions, my own, nobody else's, whatsoever ...

Man muss sich notfalls jemand mieten,
hat man an Geist selbst nichts zu bieten!     (Heinz Erhardt)

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu