AMBER Archive (2004)

Subject: Re: AMBER: Nonplanar ring systems in nucleic acid

From: Jiri Sponer (sponer_at_ncbr.chemi.muni.cz)
Date: Thu May 20 2004 - 06:46:41 CDT

Dear Ilyas:

The most recent related is probably
Unique tertiary and neighbor interactions determine conservation
patterns of cisW.C A/G base pairs,
Journal of molecular biology 330, 967-978, 2003
with additional references cited therein.

I am out of lab this week but you can contact
me over the weekend directly via my e-mail, see below.

regards

Jiri

-------------------------------------------------------
Jiri Sponer
Professor of Biophysics
Institute of Biophysics
Academy of Sciences of the Czech Republic
Kralovopolska 135
CZ-61265 Brno
Czech Republic
e-mail: sponer_at_ncbr.chemi.muni.cz
fax: 420 5412 12179
phone: 420 5415 17133
http://www.ibp.cz/labs/LSDNA/
http://ncbr.chemi.muni.cz
Senior Wellcome Trust International Research Fellow for Biomedical Science
--------------------------------------------------------

> Hi amberlist members,
>
> I am trying to find some papers on nonplanar ring systems of nucleic
> acids. Particularly, I am interested on the amino group of cytosine ring.
> Do anyone of you know any reference on this subject? Any papers published
> by Jiri Sponer or Pavel Hobza on this nonplanar geometry, or by anyone
> else? Thanks in advance.
>
> Best,
>
> --
> Ilyas Yildirim
> ---------------------------------------------------------------
> - Department of Chemisty - Home Address: -
> - University of Rochester - -
> - Hutchison Hall, Office B10 - 60 Crittenden Blvd. Apt. 232 -
> - Rochester, NY 14627-0216 - Rochester, NY 14620 -
> - Ph.:(585) 275 67 66 (Office) - Ph.:(585) 242 91 37 (Home) -
> - Homepage: http://www.pas.rochester.edu/~yildirim/ -
> ---------------------------------------------------------------
>
>
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