AMBER Archive (2004)

Subject: Re: AMBER: what does EAMBER stand for?

From: Scott Brozell (sbrozell_at_scripps.edu)
Date: Tue May 11 2004 - 12:45:09 CDT

Hi,

Of the many ways to approach this problem, two give quick results:

1. Google EAMBER
The third hit and the first obviously relevant hit is
http://amber.ch.ic.ac.uk/archive/200308/0081.html
wherein Kristina Furse discusses EAMBER in an Amber Reflector message.

2. grep the source directory
cd src/sander
grep EAMBER *
Only two source files are produced: dynlib.f and printe.f.
Examining either leads to a format number that leads to a write
statement that leads to a mathematical expression defining EAMBER.

Grep is awesome. So awesome that I was surprised to learn that only
19 of my 345 tcsh aliases use grep !
However, I use this one daily:
a f.g "find . -name '*' -print | xargs grep -in \!* | less"

Now to make this entertaining to the ~700 world wide subscribers
of the Amber Reflector, I end on a favorite lunch time expression:

GREP This !

Scott Brozell

On Tue, 11 May 2004, scopio wrote:

> Dear AMBER users:
>
> I notice there is EAMBER item printed out in AMBER7 minimisation out
> file. I wonder what it stands for. Could anyone who knows it please tell
> me? Moreover, where could I find the description for min/md output in
> details? Thanks in advance!
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu