AMBER Archive (2004)

Subject: AMBER: what is its file format ?

From: scopio (scopio_at_163.com)
Date: Sat May 08 2004 - 09:13:21 CDT

Dear Amber users:

I have a file, which posted below, looks like a topology file, but I
don't know what the file format it is. Could anyone who knows it please
tell me?

========
RESIDUE crb
atoms
group
coo c 0.648430
......
end

imphd
c1 n3 c2 o2 c2 c4 n3 h3 c8 oxt c o
c4 n5 c5 o5
....
end

backbone n1 c1 c2 n3 c4 c5 n5 c8 c oxt
termatom * *
don n1 h11
....
phobic ca2 ca3 ca4 ca5 ca6 ct2 ct3
RESIDUE_END
=========

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