AMBER Archive (2004)

Subject: Re: AMBER: %GIBBS-F-MISMATCH, The parm and coord files disagree on the number of atoms

From: David A. Case (case_at_scripps.edu)
Date: Wed Apr 28 2004 - 12:56:10 CDT


On Wed, Apr 28, 2004, Jiten wrote:
>
> When I run the Gibbs, I got the following error
>
> %GIBBS-F-MISMATCH, The parm and coord files disagree on the number of atoms
>
> In amber reflector, somebody suggested to check the number of atoms in top and crd files.
>
> Here it is
>
> *.crd
>
> 22214

You need to manually remove the space in column 1 of the above line: gibbs
expects to read the number of atoms in an I5 format, not I6.

...regards...dac

-- 

================================================================== David A. Case | e-mail: case_at_scripps.edu Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896 The Scripps Research Institute | phone: +1-858-784-9768 10550 N. Torrey Pines Rd. | home page: La Jolla CA 92037 USA | http://www.scripps.edu/case ================================================================== ----------------------------------------------------------------------- The AMBER Mail Reflector To post, send mail to amber_at_scripps.edu To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu