AMBER Archive (2004)

Subject: AMBER: Simulation of lipid bilayers

From: Greg Jezierski (gregjezierski_at_netscape.net)
Date: Tue Apr 20 2004 - 09:41:50 CDT

Dear AMBER users,
I am going to perform a calculation of a system consisting of a protein
  in a phospholipid bilayer plus water.
May one employ OPLS (united atom) forcefield for the membrane and an
AMBER all atom forcefield for the rest of the system? Does Anyone have
any experience with such a combination? I presume that technically that
should be done at the code level - is that so?
Thanks in advance,
Grzegorz Jezierski

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu