AMBER Archive (2004)

Subject: Re: AMBER: segmentation fault when running parmchk

From: David A. Case (
Date: Wed Mar 31 2004 - 11:50:54 CST

On Tue, Mar 30, 2004, Ye Mei wrote:
> When I run parmchk command to build frcmod file, it always give segmentation
> fault. I have tried gcc and pgcc to build parmchk program, but the results
> are the same. The machine is P4 2.8GHz with SuSE8.2. I also built a copy
> with gcc on Athlon XP 1800+ with SuSE8.2. It works fine. Then I copied it to
> P4 machine, it also failed. Has anyone ever meet this problem?

Does it also fail when running the antechamber test cases? (These test
cases invoke the parmchk program). Knowing that would help rule out any
problems with your input files.



================================================================== David A. Case | e-mail: Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896 The Scripps Research Institute | phone: +1-858-784-9768 10550 N. Torrey Pines Rd. | home page: La Jolla CA 92037 USA | ================================================================== ----------------------------------------------------------------------- The AMBER Mail Reflector To post, send mail to To unsubscribe, send "unsubscribe amber" to