AMBER Archive (2004)

Subject: Re: AMBER: fix two groups

From: Carlos Simmerling (carlos_at_csb.sunysb.edu)
Date: Sun Mar 28 2004 - 21:16:17 CST

can you be more specific? do you want sander to modify the relative orientation of
the groups, or just calculate the values? do you want to change their distance, angle,
rmsd, etc? please let us know what you want to do and we might be able to help more.
carlos
  ----- Original Message -----
  From: Helios Chen
  To: amber_at_scripps.edu
  Sent: Sunday, March 28, 2004 10:07 PM
  Subject: AMBER: fix two groups

  Dear amber users, I want to fix two segments on the one protein, and calculate the relative changes each other by sander MD program. Are there any restriction I can fix these two groups?

  Best Regards.

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