AMBER Archive (2004)

Subject: Re: AMBER: segmentation fault

From: David A. Case (case_at_scripps.edu)
Date: Thu Mar 18 2004 - 10:19:04 CST

On Thu, Mar 18, 2004, Hailong Lin wrote:

> i am using amber7 ,working on the haloperoxidase with a Vanadium in its
> active site. when doing LEap, after the topology file was saved the program
> ended with ' Segmentaion fault (core dumped) '.

We are going to need to see the pdb file you are using, and the commands
you gave to leap, as well as the frcmod file you used. You mention (but
don't really show) other leap messages (e.g. "unknonw atom type") that may
be important here.

...regards...dac
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu