AMBER Archive (2004)

Subject: Re: AMBER: Star like (branching) molecule

From: Bill Ross (
Date: Tue Feb 24 2004 - 17:40:13 CST

> Yesterday I had asked how to build a star like molecule if only 1 tail
> can be defined.

The head, tail and connect atoms are for automated bonding,
i.e. on reading in a pdb file.

You can bond any atoms with the 'bond' command, ignoring the
head/tail/connect attributes of the atoms.

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