AMBER Archive (2004)

Subject: AMBER: carnal

From: Youyi Peng (pengyo_at_UMDNJ.EDU)
Date: Tue Feb 24 2004 - 10:36:11 CST

Dear AMBER users,
I used carnal to concatenate several mdcrd trajectory file into one file
and then read the file into carnal to do RMS fit. I got the error
message " too many numbers on box line for mdcrd format - bad coord
file or carnal bug" . The carnal input file to combine the trajectory
file is as followed. Anything wrong? By the way my system is
water-solvated. Thanks.

Youyi

carnal input file:

FILES_IN
  PARM p1 pfmrk_sol.prmtop.gz;
  STREAM s1 3.crd.gz 4.crd.gz 5.crd.gz 6.crd.gz 7.crd.gz 8.crd.gz
9.crd.gz;
FILES_OUT
  COORD c1 MDtraj_pt.crd CRD;
DECLARE

OUTPUT
  COORD c1 s1;
END

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