AMBER Archive (2004)

Subject: Re: AMBER: Defining residues

From: Bill Ross (ross_at_cgl.ucsf.edu)
Date: Mon Feb 23 2004 - 12:04:33 CST


> > set RES head RES.1.H1
> > set RES tail RES.1.H11
> > set RES tail RES.1.H12
>
> As I understand it, this won't work. The third command above will override
> what was done in the second command -- residues have only one "tail".
 
However I'm not sure if it matters - the 'connect' atoms
are used for actual bonding as far as I know, and changing
the tail from one atom to another should not be a problem
in and of itself.

Note that the pdb file had HETATM rather than ATOM records,
not sure if this makes a difference either.

Bill
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