AMBER Archive (2004)

Subject: AMBER: How does LEaP place Na+ ions?

From: tang kwa (nongtangkwa_at_yahoo.com)
Date: Thu Jan 22 2004 - 04:10:16 CST

Dear All,

TO neutralize the system containing DNA and water,
LEaP module can be used to add Na+ ions. Could anyone
tell me how Na+ ions are placed, at positions of
bisector O1P-P-O2P, or iterative electrostatic
calculations?
Many thanks inadvance.

Yours,
Tangkwa

__________________________________
Do you Yahoo!?
Yahoo! SiteBuilder - Free web site building tool. Try it!
http://webhosting.yahoo.com/ps/sb/

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu