AMBER Archive (2003)

Subject: AMBER: Antechamber & Ptraj/Rdparm

From: L Jin (s0344557_at_sms.ed.ac.uk)
Date: Wed Dec 10 2003 - 09:07:25 CST

Dear all users,

I have some small problems about using the AMBER.

*I cannot load the pdb file into the xleap without loading the prep file after I
got the charges and atom types from ANTECHAMBER?

*It seems I cannot use the commands of ddrive, analyze and rms in Rdparm.

*And the Ptraj seems do not work. It only displays the 'processing the input
file' after I type in the prmtop file without any further action.

Please give me some suggestion about these. Thank you very much.

Looking forward reply.
Lan

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