AMBER Archive (2003)Subject: Re: AMBER: constant pressure in GB
From: David Case (case_at_scripps.edu)
Date: Thu Oct 02 2003 - 06:53:32 CDT
On Wed, Oct 01, 2003, aini_at_UMDNJ.EDU wrote:
>
> Is it possible to have constant pressure (e.g. 1 atm) in GB simulation?
There is no concept of external pressure in these implicit solvent models...
The "water" is assumed to be at 1 atm pressure. The pressure printed as
"zero" means "no pressure" not "zero pressure".
...dac
--
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David A. Case | e-mail: case_at_scripps.edu
Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896
The Scripps Research Institute | phone: +1-858-784-9768
10550 N. Torrey Pines Rd. | home page:
La Jolla CA 92037 USA | http://www.scripps.edu/case
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