AMBER Archive (2003)

Subject: Re: AMBER: ANAL component

From: David A. Case (case_at_scripps.edu)
Date: Wed Aug 13 2003 - 17:45:36 CDT

On Wed, Aug 13, 2003, sd233_at_georgetown.edu wrote:
>
> I have a problem with ANAL. My PBC system contains approx 53000 atoms.
> ANAL is giving me a message indicating that it is unable to allocate
> appropriate memory. It says that it is allocating 0 bytes of memory.
> Am I over loading the buffer? I noticed in the source that memory for
> this activity is dynamically allocated. Is my system simply too large?
> too many atoms?
>

There was a report like this a short while ago, but no details were ever
provided....

What happens with the test cases? (cd amber7/test; make test.anal)?

What is the exact error message? What sort of machine are you on?

..thx...dac 

-- 

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David A. Case                     |  e-mail:      case_at_scripps.edu
Dept. of Molecular Biology, TPC15 |  fax:          +1-858-784-8896
The Scripps Research Institute    |  phone:        +1-858-784-9768
10550 N. Torrey Pines Rd.         |  home page:                   
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