AMBER Archive (2003)

Subject: Does Leap has a problem with Isoleucines?

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Hello, I've done the tutorial for plastocyanin, and after protonating the
protein, and putting the file in leap, with leaprc.ff94 I end up getting this:

FATAL: Atom .R<ILE 8>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 28>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 30>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 30>.A<CD2 21> does not have a type.
FATAL: Atom .R<ILE 32>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 34>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 34>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 42>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 44>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 44>.A<CD2 21> does not have a type.
FATAL: Atom .R<ILE 46>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 48>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 48>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 70>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 78>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 92>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 94>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 102>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 104>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 104>.A<CD2 21> does not have a type.
FATAL: Atom .R<ILE 106>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 108>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 108>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 124>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 126>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 126>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 128>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 128>.A<CE2 21> does not have a type.
FATAL: Atom .R<ILE 128>.A<CG 22> does not have a type.
FATAL: Atom .R<ILE 130>.A<CE1 20> does not have a type.
FATAL: Atom .R<ILE 130>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 132>.A<CE2 20> does not have a type.
FATAL: Atom .R<ILE 132>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 132>.A<CD2 22> does not have a type.
FATAL: Atom .R<ILE 134>.A<CZ 20> does not have a type.
FATAL: Atom .R<ILE 134>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 134>.A<CE2 22> does not have a type.
FATAL: Atom .R<ILE 151>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 153>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 153>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 155>.A<CD 20> does not have a type.
FATAL: Atom .R<ILE 155>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 163>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 165>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 173>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 175>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 175>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 183>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 185>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 185>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 187>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 187>.A<CE2 21> does not have a type.
FATAL: Atom .R<ILE 187>.A<CG 22> does not have a type.
FATAL: Atom .R<ILE 189>.A<CE1 20> does not have a type.
FATAL: Atom .R<ILE 189>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 191>.A<CE2 20> does not have a type.
FATAL: Atom .R<ILE 191>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 191>.A<CD2 22> does not have a type.
FATAL: Atom .R<ILE 193>.A<CZ 20> does not have a type.
FATAL: Atom .R<ILE 193>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 193>.A<CE2 22> does not have a type.
FATAL: Atom .R<ILE 201>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 203>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 214>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 216>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 221>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 223>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 223>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 225>.A<CD 20> does not have a type.
FATAL: Atom .R<ILE 225>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 239>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 241>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 241>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 249>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 251>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 251>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 253>.A<CD 20> does not have a type.
FATAL: Atom .R<ILE 253>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 253>.A<CE 22> does not have a type.
FATAL: Atom .R<ILE 255>.A<CE 20> does not have a type.
FATAL: Atom .R<ILE 255>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 255>.A<NZ 22> does not have a type.
FATAL: Atom .R<ILE 257>.A<NZ 20> does not have a type.
FATAL: Atom .R<ILE 257>.A<CE 21> does not have a type.
FATAL: Atom .R<ILE 257>.A<CD 22> does not have a type.
FATAL: Atom .R<ILE 280>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 282>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 282>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 284>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 284>.A<CE2 21> does not have a type.
FATAL: Atom .R<ILE 284>.A<CG 22> does not have a type.
FATAL: Atom .R<ILE 286>.A<CE1 20> does not have a type.
FATAL: Atom .R<ILE 286>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 288>.A<CE2 20> does not have a type.
FATAL: Atom .R<ILE 288>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 288>.A<CD2 22> does not have a type.
FATAL: Atom .R<ILE 290>.A<CZ 20> does not have a type.
FATAL: Atom .R<ILE 290>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 290>.A<CE2 22> does not have a type.
FATAL: Atom .R<ILE 298>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 300>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 300>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 302>.A<CD 20> does not have a type.
FATAL: Atom .R<ILE 302>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 302>.A<CE 22> does not have a type.
FATAL: Atom .R<ILE 304>.A<CE 20> does not have a type.
FATAL: Atom .R<ILE 304>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 304>.A<NZ 22> does not have a type.
FATAL: Atom .R<ILE 306>.A<NZ 20> does not have a type.
FATAL: Atom .R<ILE 306>.A<CE 21> does not have a type.
FATAL: Atom .R<ILE 306>.A<CD 22> does not have a type.
FATAL: Atom .R<ILE 314>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 316>.A<ND2 20> does not have a type.
FATAL: Atom .R<ILE 316>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 316>.A<OD1 22> does not have a type.
FATAL: Atom .R<ILE 324>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 326>.A<ND2 20> does not have a type.
FATAL: Atom .R<ILE 326>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 326>.A<OD1 22> does not have a type.
FATAL: Atom .R<ILE 348>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 350>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 350>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 352>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 352>.A<CE2 21> does not have a type.
FATAL: Atom .R<ILE 352>.A<CG 22> does not have a type.
FATAL: Atom .R<ILE 354>.A<CE1 20> does not have a type.
FATAL: Atom .R<ILE 354>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 356>.A<CE2 20> does not have a type.
FATAL: Atom .R<ILE 356>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 356>.A<CD2 22> does not have a type.
FATAL: Atom .R<ILE 358>.A<CZ 20> does not have a type.
FATAL: Atom .R<ILE 358>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 358>.A<CE2 22> does not have a type.
FATAL: Atom .R<ILE 363>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 365>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 365>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 367>.A<CD 20> does not have a type.
FATAL: Atom .R<ILE 367>.A<CG 21> does not have a type.
FATAL: Atom .R<HIC 369>.A<N 1> does not have a type.
FATAL: Atom .R<HIC 372>.A<H 1> does not have a type.
FATAL: Atom .R<HIC 372>.A<CA 2> does not have a type.
FATAL: Atom .R<HIC 374>.A<HA 1> does not have a type.
FATAL: Atom .R<HIC 374>.A<C 2> does not have a type.
FATAL: Atom .R<HIC 374>.A<O 3> does not have a type.
FATAL: Atom .R<HIC 374>.A<CB 4> does not have a type.
FATAL: Atom .R<ILE 375>.A<CG 20> does not have a type.
FATAL: Atom .R<HIC 376>.A<HB3 1> does not have a type.
FATAL: Atom .R<HIC 376>.A<HB2 2> does not have a type.
FATAL: Atom .R<HIC 376>.A<CG 3> does not have a type.
FATAL: Atom .R<HIC 376>.A<ND1 4> does not have a type.
FATAL: Atom .R<HIC 376>.A<CD2 5> does not have a type.
FATAL: Atom .R<ILE 377>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 377>.A<NE2 21> does not have a type.
FATAL: Atom .R<ILE 377>.A<CG 22> does not have a type.
FATAL: Atom .R<HIC 378>.A<HD2 1> does not have a type.
FATAL: Atom .R<HIC 378>.A<CE1 2> does not have a type.
FATAL: Atom .R<ILE 379>.A<CE1 20> does not have a type.
FATAL: Atom .R<ILE 379>.A<ND1 21> does not have a type.
FATAL: Atom .R<ILE 379>.A<NE2 22> does not have a type.
FATAL: Atom .R<HIC 380>.A<HE1 1> does not have a type.
FATAL: Atom .R<HIC 380>.A<NE2 2> does not have a type.
FATAL: Atom .R<ILE 381>.A<NE2 20> does not have a type.
FATAL: Atom .R<ILE 381>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 381>.A<CD2 22> does not have a type.
FATAL: Atom .R<HIC 382>.A<HE2 1> does not have a type.
FATAL: Atom .R<HIC 382>.A<CU 2> does not have a type.
FATAL: Atom .R<ILE 389>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 391>.A<ND2 20> does not have a type.
FATAL: Atom .R<ILE 391>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 391>.A<OD1 22> does not have a type.
FATAL: Atom .R<ILE 414>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 416>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 416>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 418>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 418>.A<CE2 21> does not have a type.
FATAL: Atom .R<ILE 418>.A<CG 22> does not have a type.
FATAL: Atom .R<ILE 420>.A<CE1 20> does not have a type.
FATAL: Atom .R<ILE 420>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 422>.A<CE2 20> does not have a type.
FATAL: Atom .R<ILE 422>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 422>.A<CD2 22> does not have a type.
FATAL: Atom .R<ILE 424>.A<CZ 20> does not have a type.
FATAL: Atom .R<ILE 424>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 424>.A<CE2 22> does not have a type.
FATAL: Atom .R<ILE 432>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 440>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 442>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 442>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 450>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 458>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 460>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 468>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 470>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 470>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 472>.A<CD 20> does not have a type.
FATAL: Atom .R<ILE 472>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 480>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 482>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 508>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 524>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 526>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 534>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 536>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 536>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 538>.A<CD 20> does not have a type.
FATAL: Atom .R<ILE 538>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 538>.A<CE 22> does not have a type.
FATAL: Atom .R<ILE 540>.A<CE 20> does not have a type.
FATAL: Atom .R<ILE 540>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 540>.A<NZ 22> does not have a type.
FATAL: Atom .R<ILE 542>.A<NZ 20> does not have a type.
FATAL: Atom .R<ILE 542>.A<CE 21> does not have a type.
FATAL: Atom .R<ILE 542>.A<CD 22> does not have a type.
FATAL: Atom .R<ILE 553>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 555>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 563>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 565>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 565>.A<SD 21> does not have a type.
FATAL: Atom .R<ILE 567>.A<CE 20> does not have a type.
FATAL: Atom .R<ILE 567>.A<SD 21> does not have a type.
FATAL: Atom .R<ILE 567>.A<CG 22> does not have a type.
FATAL: Atom .R<ILE 575>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 577>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 585>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 587>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 587>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 595>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 597>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 597>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 605>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 613>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 615>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 615>.A<CD2 21> does not have a type.
FATAL: Atom .R<ILE 617>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 619>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 619>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 627>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 629>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 629>.A<CD2 21> does not have a type.
FATAL: Atom .R<ILE 631>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 633>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 633>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 641>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 643>.A<ND2 20> does not have a type.
FATAL: Atom .R<ILE 643>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 643>.A<OD1 22> does not have a type.
FATAL: Atom .R<ILE 659>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 661>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 661>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 663>.A<CD 20> does not have a type.
FATAL: Atom .R<ILE 663>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 663>.A<CE 22> does not have a type.
FATAL: Atom .R<ILE 665>.A<CE 20> does not have a type.
FATAL: Atom .R<ILE 665>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 665>.A<NZ 22> does not have a type.
FATAL: Atom .R<ILE 667>.A<NZ 20> does not have a type.
FATAL: Atom .R<ILE 667>.A<CE 21> does not have a type.
FATAL: Atom .R<ILE 667>.A<CD 22> does not have a type.
FATAL: Atom .R<ILE 681>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 683>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 683>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 691>.A<OG1 20> does not have a type.
FATAL: Atom .R<ILE 693>.A<OG1 20> does not have a type.
FATAL: Atom .R<ILE 703>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 705>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 705>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 707>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 707>.A<CE2 21> does not have a type.
FATAL: Atom .R<ILE 707>.A<CG 22> does not have a type.
FATAL: Atom .R<ILE 709>.A<CE1 20> does not have a type.
FATAL: Atom .R<ILE 709>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 711>.A<CE2 20> does not have a type.
FATAL: Atom .R<ILE 711>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 711>.A<CD2 22> does not have a type.
FATAL: Atom .R<ILE 713>.A<CZ 20> does not have a type.
FATAL: Atom .R<ILE 713>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 713>.A<CE2 22> does not have a type.
FATAL: Atom .R<ILE 721>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 723>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 723>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 751>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 753>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 753>.A<CD2 21> does not have a type.
FATAL: Atom .R<ILE 755>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 757>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 757>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 765>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 767>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 775>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 777>.A<ND2 20> does not have a type.
FATAL: Atom .R<ILE 777>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 777>.A<OD1 22> does not have a type.
FATAL: Atom .R<ILE 785>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 787>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 787>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 789>.A<CD 20> does not have a type.
FATAL: Atom .R<ILE 789>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 789>.A<CE 22> does not have a type.
FATAL: Atom .R<ILE 791>.A<CE 20> does not have a type.
FATAL: Atom .R<ILE 791>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 791>.A<NZ 22> does not have a type.
FATAL: Atom .R<ILE 793>.A<NZ 20> does not have a type.
FATAL: Atom .R<ILE 793>.A<CE 21> does not have a type.
FATAL: Atom .R<ILE 793>.A<CD 22> does not have a type.
FATAL: Atom .R<ILE 807>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 809>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 809>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 817>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 819>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 819>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 821>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 821>.A<CE2 21> does not have a type.
FATAL: Atom .R<ILE 821>.A<CG 22> does not have a type.
FATAL: Atom .R<ILE 823>.A<CE1 20> does not have a type.
FATAL: Atom .R<ILE 823>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 825>.A<CE2 20> does not have a type.
FATAL: Atom .R<ILE 825>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 825>.A<CD2 22> does not have a type.
FATAL: Atom .R<ILE 827>.A<OH 20> does not have a type.
FATAL: Atom .R<ILE 827>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 827>.A<CE1 22> does not have a type.
FATAL: Atom .R<ILE 835>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 837>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 845>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 847>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 847>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 849>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 849>.A<CE2 21> does not have a type.
FATAL: Atom .R<ILE 849>.A<CG 22> does not have a type.
FATAL: Atom .R<ILE 851>.A<CE1 20> does not have a type.
FATAL: Atom .R<ILE 851>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 853>.A<CE2 20> does not have a type.
FATAL: Atom .R<ILE 853>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 853>.A<CD2 22> does not have a type.
FATAL: Atom .R<ILE 855>.A<CZ 20> does not have a type.
FATAL: Atom .R<ILE 855>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 855>.A<CE2 22> does not have a type.
FATAL: Atom .R<ILE 863>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 865>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 865>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 867>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 867>.A<CE2 21> does not have a type.
FATAL: Atom .R<ILE 867>.A<CG 22> does not have a type.
FATAL: Atom .R<ILE 869>.A<CE1 20> does not have a type.
FATAL: Atom .R<ILE 869>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 871>.A<CE2 20> does not have a type.
FATAL: Atom .R<ILE 871>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 871>.A<CD2 22> does not have a type.
FATAL: Atom .R<ILE 873>.A<OH 20> does not have a type.
FATAL: Atom .R<ILE 873>.A<CZ 21> does not have a type.
FATAL: Atom .R<ILE 873>.A<CE1 22> does not have a type.
FATAL: Atom .R<ILE 881>.A<SG 20> does not have a type.
FATAL: Atom .R<ILE 889>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 891>.A<OG 20> does not have a type.
FATAL: Atom .R<ILE 896>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 898>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 898>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 900>.A<CD 20> does not have a type.
FATAL: Atom .R<ILE 900>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 908>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 910>.A<CD2 20> does not have a type.
FATAL: Atom .R<ILE 910>.A<NE2 21> does not have a type.
FATAL: Atom .R<ILE 910>.A<CG 22> does not have a type.
FATAL: Atom .R<ILE 912>.A<CE1 20> does not have a type.
FATAL: Atom .R<ILE 912>.A<ND1 21> does not have a type.
FATAL: Atom .R<ILE 912>.A<NE2 22> does not have a type.
FATAL: Atom .R<ILE 914>.A<NE2 20> does not have a type.
FATAL: Atom .R<ILE 914>.A<CE1 21> does not have a type.
FATAL: Atom .R<ILE 914>.A<CD2 22> does not have a type.
FATAL: Atom .R<ILE 922>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 924>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 924>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 926>.A<NE2 20> does not have a type.
FATAL: Atom .R<ILE 926>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 926>.A<CG 22> does not have a type.
FATAL: Atom .R<ILE 926>.A<OE1 23> does not have a type.
FATAL: Atom .R<MEM 948>.A<N 1> does not have a type.
FATAL: Atom .R<MEM 951>.A<H 1> does not have a type.
FATAL: Atom .R<MEM 951>.A<CA 2> does not have a type.
FATAL: Atom .R<MEM 953>.A<HA 1> does not have a type.
FATAL: Atom .R<MEM 953>.A<C 2> does not have a type.
FATAL: Atom .R<MEM 953>.A<O 3> does not have a type.
FATAL: Atom .R<MEM 953>.A<CB 4> does not have a type.
FATAL: Atom .R<ILE 954>.A<CG 20> does not have a type.
FATAL: Atom .R<MEM 955>.A<HB3 1> does not have a type.
FATAL: Atom .R<MEM 955>.A<HB2 2> does not have a type.
FATAL: Atom .R<MEM 955>.A<CG 3> does not have a type.
FATAL: Atom .R<ILE 956>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 956>.A<SD 21> does not have a type.
FATAL: Atom .R<MEM 957>.A<HG3 1> does not have a type.
FATAL: Atom .R<MEM 957>.A<HG2 2> does not have a type.
FATAL: Atom .R<MEM 957>.A<SD 3> does not have a type.
FATAL: Atom .R<MEM 957>.A<CE 4> does not have a type.
FATAL: Atom .R<ILE 958>.A<CE 20> does not have a type.
FATAL: Atom .R<ILE 958>.A<SD 21> does not have a type.
FATAL: Atom .R<ILE 958>.A<CG 22> does not have a type.
FATAL: Atom .R<MEM 959>.A<HE1 1> does not have a type.
FATAL: Atom .R<MEM 959>.A<HE2 2> does not have a type.
FATAL: Atom .R<MEM 959>.A<HE3 3> does not have a type.
FATAL: Atom .R<ILE 984>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 986>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 986>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 988>.A<CD 20> does not have a type.
FATAL: Atom .R<ILE 988>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 988>.A<CE 22> does not have a type.
FATAL: Atom .R<ILE 990>.A<CE 20> does not have a type.
FATAL: Atom .R<ILE 990>.A<CD 21> does not have a type.
FATAL: Atom .R<ILE 990>.A<NZ 22> does not have a type.
FATAL: Atom .R<ILE 992>.A<NZ 20> does not have a type.
FATAL: Atom .R<ILE 992>.A<CE 21> does not have a type.
FATAL: Atom .R<ILE 992>.A<CD 22> does not have a type.
FATAL: Atom .R<ILE 1012>.A<OG1 20> does not have a type.
FATAL: Atom .R<ILE 1014>.A<OG1 20> does not have a type.
FATAL: Atom .R<ILE 1036>.A<CG 20> does not have a type.
FATAL: Atom .R<ILE 1038>.A<ND2 20> does not have a type.
FATAL: Atom .R<ILE 1038>.A<CG 21> does not have a type.
FATAL: Atom .R<ILE 1038>.A<OD1 22> does not have a type.
Failed to generate parameters
Parameter file was not saved.
>

I don't understand where the problem is. Could someone help me please? Thank
you.

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